AIscEA: unsupervised integration of single-cell gene expression and chromatin accessibility via their biological consistency.
Elham JafariTravis S. JohnsonYue WangYunlong LiuKun HuangYijie WangPublished in: Bioinform. (2022)
Keyphrases
- gene expression
- biological processes
- gene regulation
- microarray
- drosophila melanogaster
- gene expression data analysis
- regulatory networks
- gene expression patterns
- gene expression analysis
- gene expression data
- transcription factors
- gene interactions
- cell cycle
- microarray data
- dna microarray
- high throughput
- molecular biology
- functional genomics
- cell biology
- microarray technology
- gene products
- analysis of gene expression
- systems biology
- protein interaction
- biological knowledge
- gene regulatory networks
- biological data
- signaling pathways
- saccharomyces cerevisiae
- data integration
- gene expression profiles
- binding sites
- biological systems
- differentially expressed genes
- dna sequences
- cell nuclei
- biological networks
- gene expression levels
- interaction networks
- gene networks
- genomic sequences
- protein protein interactions
- gene selection
- data sets