Iterated Local Search for de Novo Genomic Sequencing.
Bernabé DorronsoroPascal BouvryEnrique AlbaPublished in: ICAISC (2) (2010)
Keyphrases
- iterated local search
- human genome
- metaheuristic
- high throughput sequencing
- rna seq
- tabu search
- tandem mass spectrometry
- multi start
- genomic sequences
- vehicle routing problem with time windows
- genome wide
- vehicle routing problem
- high throughput
- sequence data
- dna sequences
- ant colony optimization
- simulated annealing
- scatter search
- genetic algorithm
- flowshop
- optimization problems
- scheduling problem
- variable neighborhood descent
- global optimization
- combinatorial optimization
- mass spectrometry
- path relinking
- stochastic approximation
- optimal solution
- search space
- search procedure
- tandem mass spectra
- evolutionary algorithm
- alternative splicing
- search algorithm
- special case
- neural network
- heuristic methods
- feasible solution