Unbiased organism-agnostic and highly sensitive signal peptide predictor with deep protein language model.
Junbo ShenQinze YuShenyang ChenQingxiong TanJingchen LiYu LiPublished in: Nat. Comput. Sci. (2024)
Keyphrases
- language model
- amino acids
- tandem mass spectra
- mass spectrometry
- mass spectra
- language modeling
- n gram
- document retrieval
- tandem mass spectrometry
- probabilistic model
- speech recognition
- language modelling
- protein sequences
- test collection
- statistical language models
- query expansion
- ms ms
- information retrieval
- mixture model
- context sensitive
- retrieval model
- vector space model
- high throughput
- word error rate
- protein structure
- query terms
- ad hoc information retrieval
- amino acid sequences
- document ranking
- translation model
- language model for information retrieval
- statistical machine translation
- secondary structure
- machine learning
- smoothing methods
- search engine
- language models for information retrieval