Efficient recognition of folds in protein 3D structures by the improved PRIDE algorithm.
Zoltán GáspáriKristian VlahovicekSándor PongorPublished in: Bioinform. (2005)
Keyphrases
- protein structure
- protein sequences
- recognition algorithm
- improved algorithm
- experimental evaluation
- computationally efficient
- computational cost
- times faster
- single pass
- significant improvement
- dynamic programming
- learning algorithm
- high accuracy
- probabilistic model
- high efficiency
- np hard
- preprocessing
- segmentation algorithm
- optimization algorithm
- image matching
- object recognition
- pruning strategy
- objective function
- preprocessing stage
- particle swarm optimization
- handwritten digits
- expectation maximization
- search space
- computational complexity
- search algorithm
- similarity measure