An information retrieval perspective on visualization of gene expression data with ontological annotation.
Jaakko PeltonenHelena AidosNils GehlenborgAlvis BrazmaSamuel KaskiPublished in: ICASSP (2010)
Keyphrases
- gene expression data
- information retrieval
- gene expression
- microarray
- microarray data
- data sets
- gene expression datasets
- gene expression profiles
- gene regulatory networks
- high dimensionality
- high dimensional data
- gene expression analysis
- feature selection
- gene expression data analysis
- dna microarray data
- analysis of gene expression data
- information extraction
- microarray gene expression data
- gene selection
- gene expression data sets
- data analysis
- dna microarray
- high dimensional
- cancer classification
- gene expression patterns
- gene expression profiling
- clustering gene expression data
- cancer diagnosis
- gene networks
- regulatory networks
- knowledge discovery
- high throughput
- text mining
- self organizing maps
- gene function
- gene ontology terms
- biological information
- biological networks
- tumor classification
- yeast cell cycle
- dimensionality reduction