A novel algorithm for genomic STR mining: application to phylogeny reconstruction and taxa identification.
Uddalak MitraSoumya MajumderSayantan BhowmickPublished in: Int. J. Bioinform. Res. Appl. (2024)
Keyphrases
- cost function
- learning algorithm
- computational complexity
- k means
- high accuracy
- segmentation algorithm
- dynamic programming
- np hard
- optimization algorithm
- preprocessing
- optimal solution
- discrete tomography
- detection algorithm
- image reconstruction
- sequence data
- expectation maximization
- worst case
- particle swarm optimization
- probabilistic model
- experimental evaluation
- significant improvement
- objective function
- evolutionary algorithm
- matching algorithm
- convergence rate
- recognition algorithm
- similarity measure
- apriori algorithm
- single pass
- decision trees