Multiple organism algorithm for finding ultraconserved elements.
Scott ChristleyNeil F. LoboGregory R. MadeyPublished in: BMC Bioinform. (2008)
Keyphrases
- dynamic programming
- optimal solution
- detection algorithm
- k means
- learning algorithm
- times faster
- worst case
- improved algorithm
- theoretical analysis
- experimental evaluation
- significant improvement
- preprocessing
- recognition algorithm
- expectation maximization
- segmentation algorithm
- matching algorithm
- hardware implementation
- single pass
- selection algorithm
- estimation algorithm
- convergence rate
- memory requirements
- space complexity
- tree structure
- clustering method
- optimization algorithm
- particle swarm optimization
- high accuracy
- scheduling problem
- state space
- np hard
- hidden markov models
- objective function
- multiscale