Identifying context-specific transcription factor targets from prior knowledge and gene expression data.
Elana J. FertigAlexander V. FavorovMichael F. OchsPublished in: BIBM (2012)
Keyphrases
- gene expression data
- context specific
- transcription factors
- microarray
- gene expression
- gene regulation
- regulatory networks
- saccharomyces cerevisiae
- binding sites
- microarray data
- high throughput
- gene regulatory networks
- biological processes
- gene expression levels
- data sets
- gene selection
- high dimensionality
- gene expression patterns
- feature selection
- high dimensional
- molecular biology
- gene expression profiles
- domain specific
- data analysis
- experimental conditions
- gene expression datasets
- cell cycle
- gene networks
- gene ontology
- gene sets
- graphical models
- sequence data
- transcription factor binding sites
- protein interaction
- biological networks
- feature space
- genome wide