Bayesian Prediction of DNA Binding Sites Using Parsimonious Markov Models.
Ralf EggelingPublished in: Informatiktage (2011)
Keyphrases
- binding sites
- markov models
- maximum entropy
- dna sequences
- markov model
- gene expression
- sequence data
- higher order
- protein interaction
- dna binding
- transcription factors
- biological sequences
- motif discovery
- statistical significance
- hidden markov models
- conditional random fields
- sequence alignment
- transcription factor binding sites
- regulatory elements
- maximum likelihood
- pairwise
- bayesian inference
- posterior probability
- statistically significant
- graphical models
- coding regions
- reinforcement learning