A topological algorithm for identification of structural domains of proteins.
Frank Emmert-StreibArcady R. MushegianPublished in: BMC Bioinform. (2007)
Keyphrases
- learning algorithm
- detection algorithm
- computational complexity
- experimental evaluation
- optimal solution
- theoretical analysis
- computational cost
- times faster
- worst case
- preprocessing
- significant improvement
- dynamic programming
- linear programming
- simulated annealing
- search space
- high accuracy
- cost function
- recognition algorithm
- probabilistic model
- k means
- np hard
- real world
- expectation maximization
- optimization algorithm
- objective function
- clustering method
- similarity measure
- structural information
- improved algorithm