Improved prediction of DNA and RNA binding proteins with deep learning models.
Siwen WuJun-tao GuoPublished in: Briefings Bioinform. (2024)
Keyphrases
- learning models
- cis regulatory
- dna binding
- genome wide
- sequence analysis
- hiv protease
- loss function
- machine learning
- learning algorithm
- semi supervised learning
- rna sequences
- learning tasks
- machine learning algorithms
- binding sites
- high throughput
- classification models
- protein sequences
- mhc class ii
- learning problems
- sequence data
- conditional random fields
- transcription factors
- structural motifs
- protein structure
- high throughput sequencing
- microarray
- support vector
- feature vectors
- genomic sequences
- gene regulation
- decision trees
- hidden markov models
- support vector machine
- information extraction
- image classification
- secondary structure
- computational methods