hc-OTU: A Fast and Accurate Method for Clustering Operational Taxonomic Units Based on Homopolymer Compaction.
Seunghyun ParkHyun-Soo ChoiByunghan LeeJongsik ChunJoong-Ho WonSungroh YoonPublished in: IEEE ACM Trans. Comput. Biol. Bioinform. (2018)
Keyphrases
- high accuracy
- clustering method
- experimental evaluation
- computational cost
- highly accurate
- detection method
- significant improvement
- high precision
- pairwise
- mutual information
- neural network
- synthetic data
- evolutionary algorithm
- clustering algorithm
- spectral clustering
- multiscale
- detection algorithm
- cost function
- k means
- optimization algorithm
- support vector machine svm
- similarity measure
- objective function
- segmentation method
- feature vectors