Dataflow Acceleration of Smith-Waterman with Traceback for High Throughput Next Generation Sequencing.
Konstantina KoliogeorgiNils VossSotiria FytrakiSotirios XydisGeorgi GaydadjievDimitrios SoudrisPublished in: FPL (2019)
Keyphrases
- high throughput
- smith waterman
- rna seq
- biological data
- biological sequences
- microarray
- genome wide
- systems biology
- subsequence matching
- data acquisition
- sequence alignment
- genomic data
- protein protein interactions
- molecular biology
- sequence databases
- mass spectrometry
- genomic sequences
- gene expression
- database
- sequence data
- biological networks
- motif discovery