Predicting RNA-protein binding sites and motifs through combining local and global deep convolutional neural networks.
Xiaoyong PanHong-Bin ShenPublished in: Bioinform. (2018)
Keyphrases
- binding sites
- cis regulatory
- dna binding
- convolutional neural networks
- transcription factor binding sites
- genome wide
- genome sequences
- protein protein
- transcription factors
- dna sequences
- motif discovery
- sequence alignment
- regulatory elements
- gene expression
- sequence data
- genomic sequences
- protein families
- protein interaction
- drosophila melanogaster
- structural motifs
- high throughput
- predicting protein
- biological sequences
- regulatory networks
- motif finding
- human genome
- influenza virus
- protein sequences
- secondary structure
- statistical significance
- co occurrence
- alternative splicing
- gene regulation
- protein protein interactions
- microarray