Harnessing the Power of Idle GPUs for Acceleration of Biological Sequence Alignment.
Fumihiko InoYuki KotaniYuma MunekawaKenichi HagiharaPublished in: Parallel Process. Lett. (2009)
Keyphrases
- sequence alignment
- comparative genomics
- protein structure prediction
- pairwise
- computational power
- dynamic programming
- protein sequences
- phylogenetic analysis
- amino acids
- molecular biology
- general purpose
- gpu accelerated
- power consumption
- protein structure
- biological data
- collective intelligence
- binding sites
- multiple alignment
- secondary structure
- multiple sequence alignment
- computational biology
- parallel processing
- gene expression analysis
- machine learning
- data sets