Accessibility of microRNA binding sites in metastable RNA secondary structures in the presence of SNPs.
Luke DayOuala Abdelhadi Ep SoukiAndreas Alexander AlbrechtKathleen SteinhöfelPublished in: Bioinform. (2014)
Keyphrases
- binding sites
- dna sequences
- rna sequences
- rna secondary structures
- gene expression
- transcription factors
- sequence data
- human genome
- motif discovery
- single nucleotide polymorphisms
- statistical significance
- biological sequences
- secondary structure
- genomic data
- regulatory elements
- genome wide
- transcription factor binding sites
- edit distance
- nearest neighbor
- protein interaction
- protein sequences
- machine learning methods