CaviDB: a database of cavities and their features in the structural and conformational space of proteins.
Ana Julia Velez RuedaFranco Leonardo BulgarelliNicolas PalopoliGustavo D. ParisiPublished in: Database J. Biol. Databases Curation (2023)
Keyphrases
- database
- experimentally determined
- structural information
- databases
- structural features
- computational methods
- structural similarities
- protein folding
- protein protein interactions
- object model
- protein structure
- feature extraction
- database systems
- co occurrence
- image features
- sequence similarity
- feature vectors
- relational databases
- protein function
- chemical compounds
- protein sequences
- amino acids
- space time
- data management
- feature set
- query language
- search space
- feature space