Fast batch searching for protein homology based on compression and clustering.
Hongwei GeLiang SunJinghong YuPublished in: BMC Bioinform. (2017)
Keyphrases
- protein homology
- clustering algorithm
- k means
- clustering method
- categorical data
- image compression
- hierarchical clustering
- pairwise
- self organizing maps
- unsupervised learning
- information theoretic
- data clustering
- spectral clustering
- protein structure prediction
- machine learning
- optimization problems
- building blocks