Sequence features of DNA binding sites reveal structural class of associated transcription factor.
Leelavati NarlikarAlexander J. HarteminkPublished in: Bioinform. (2006)
Keyphrases
- binding sites
- transcription factors
- biological sequences
- dna sequences
- protein families
- transcription factor binding sites
- gene expression
- dna binding
- sequence data
- motif discovery
- genome sequences
- statistical significance
- gene regulation
- rna sequences
- microarray
- co occurrence
- biological processes
- feature space
- cis regulatory
- regulatory elements
- genome wide
- gene expression data
- cell cycle
- gene sets
- protein interaction
- component analysis
- highly similar
- microarray data
- feature selection