An algorithm for chemical genomic profiling that minimizes batch effects: Bucket evaluations.
Daniel ShabtaiGuri GiaeverCorey NislowPublished in: BMC Bioinform. (2012)
Keyphrases
- experimental evaluation
- learning algorithm
- cost function
- improved algorithm
- times faster
- optimization algorithm
- expectation maximization
- dynamic programming
- k means
- preprocessing
- objective function
- computational cost
- worst case
- search space
- np hard
- image sequences
- probabilistic model
- segmentation algorithm
- simulated annealing
- image segmentation
- convergence rate
- classification algorithm
- tree structure
- computationally efficient
- optimal solution
- high accuracy
- data structure
- computational complexity
- significant improvement