MatGAT: An application that generates similarity/identity matrices using protein or DNA sequences.
James J. CampanellaLedion BitinckaJohn SmalleyPublished in: BMC Bioinform. (2003)
Keyphrases
- dna sequences
- nucleotide sequences
- homo sapiens
- regulatory elements
- gene prediction
- genomic sequences
- protein coding regions
- tandem repeats
- human genome
- problems in computational biology
- dna sequencing
- dna computing
- biological sequences
- similarity measure
- binding sites
- protein families
- sequence similarity
- transcription factor binding sites
- sequence patterns
- motif discovery
- protein structure
- coding regions
- semantic similarity
- databases
- protein structure prediction
- amino acids
- gene structure prediction
- rna sequences
- genome sequences
- protein sequences