RNA-Protein Binding Sites Prediction via Multi Scale Convolutional Gated Recurrent Unit Networks.
Zhen ShenSu-Ping DengDe-Shuang HuangPublished in: IEEE ACM Trans. Comput. Biol. Bioinform. (2020)
Keyphrases
- binding sites
- protein interaction
- dna binding
- multiscale
- cis regulatory
- protein protein
- genome wide
- genome sequences
- sequence alignment
- gene expression
- dna sequences
- protein interaction networks
- predicting protein
- transcription factors
- transcription factor binding sites
- drosophila melanogaster
- motif discovery
- sequence data
- regulatory elements
- secondary structure
- protein protein interactions
- high throughput
- protein function
- functional modules
- biological networks
- influenza virus
- protein protein interaction networks
- interaction networks
- genomic sequences
- signaling pathways
- sequence analysis
- protein structure prediction
- statistical significance
- protein families
- drug design
- protein sequences
- amino acids
- biological processes
- protein complexes
- biological sequences
- regulatory networks
- protein structure
- network analysis
- transcriptional regulation
- systems biology
- network structure
- amino acid sequences
- rna sequences
- network model
- microarray
- co occurrence
- social networks