PMS5: an efficient exact algorithm for the (l, d)-motif finding problem.

Hieu Dinh Sanguthevar Rajasekaran Vamsi Kundeti

Published in: BMC Bioinform. (2011)

Keyphrases

motif finding
dynamic programming
preprocessing
similarity measure
objective function
neural network
genetic algorithm
k means
knowledge discovery
input data
optimization algorithm
similarity search
benchmark problems
memetic algorithm