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The new SIMD Implementation of the Smith-Waterman Algorithm on Cell Microprocessor.

Witold R. RudnickiAleksander JankowskiAleksander ModzelewskiAleksander PiotrowskiAdam Zadrozny
Published in: Fundam. Informaticae (2009)
Keyphrases
  • np hard
  • parallel implementation
  • dynamic programming
  • objective function
  • smith waterman
  • optimal solution
  • data structure