by the DNA Sequence, Protein Concentrations and Long-Range Interactions.
Daria A. BeshnovaAndrey G. CherstvyYevhen VainshteinVladimir B. TeifPublished in: PLoS Comput. Biol. (2014)
Keyphrases
- dna sequences
- long range interactions
- long range
- nucleotide sequences
- homo sapiens
- regulatory elements
- gene prediction
- protein coding regions
- genomic sequences
- short range
- biologically plausible
- human genome
- protein families
- tandem repeats
- transcription factor binding sites
- problems in computational biology
- orientation selective
- binding sites
- motif discovery
- protein sequences
- dna computing
- coding regions
- gene structure prediction
- protein structure
- conditional random fields
- biological sequences
- amino acids
- sequence alignment
- sequence data
- biologically inspired
- sequence analysis
- neural network
- protein function
- protein protein interactions
- markov random field
- similarity measure