Six-fold speed-up of Smith-Waterman sequence database searches using parallel processing on common microprocessors.
Torbjørn RognesErling SeebergPublished in: Bioinform. (2000)
Keyphrases
- smith waterman
- parallel processing
- sequence databases
- subsequence matching
- biological sequences
- protein sequences
- sequence data
- similarity search
- sequential patterns
- sequential pattern mining
- sequence alignment
- biological data
- search tools
- database
- protein structure
- computer architecture
- dynamic programming
- high dimensional