M-Ionic: prediction of metal-ion-binding sites from sequence using residue embeddings.
Aditi ShenoyYogesh KalakotiDurai SundarArne ElofssonPublished in: Bioinform. (2024)
Keyphrases
- binding sites
- biological sequences
- sequence alignment
- transcription factor binding sites
- gene expression
- dna sequences
- influenza virus
- sequence data
- protein interaction
- protein structure prediction
- motif discovery
- transcription factors
- dna binding
- genome sequences
- sequence analysis
- protein protein
- protein families
- statistical significance
- genomic sequences
- regulatory networks
- microarray
- contact map
- microarray data
- automatic extraction
- pairwise