DSSP in GROMACS: Tool for Defining Secondary Structures of Proteins in Trajectories.
Sergey GorelovAnatoly TitovOlga TolichevaAndrey KonevegaAlexey ShvetsovPublished in: J. Chem. Inf. Model. (2024)
Keyphrases
- secondary structure
- protein sequences
- protein structure
- amino acids
- protein secondary structure
- amino acid sequences
- predicting protein
- protein folding
- protein function
- secondary structure of proteins
- computational methods
- protein secondary structure prediction
- sequence similarity
- tertiary structure
- protein structure prediction
- protein secondary structures
- molecular biology
- structural features
- multiple sequence alignment
- rna sequences
- multiple alignment
- physicochemical properties
- experimentally determined
- protein backbone
- computational biology
- computational approaches
- functional modules