Identifying dense subgraphs in protein-protein interaction network for gene selection from microarray data.
Tripti SwarnkarSérgio Nery SimõesAnji AnurakHelena BrentaniJyotirmoy ChatterjeeRonaldo Fumio HashimotoDavid Correa MartinsPabitra MitraPublished in: Netw. Model. Anal. Health Informatics Bioinform. (2015)
Keyphrases
- microarray data
- gene selection
- protein protein interaction networks
- biological networks
- gene expression
- biological data
- microarray
- functional modules
- cancer classification
- gene expression data
- microarray data analysis
- gene expression profiles
- feature selection
- genomic data
- high throughput
- data sets
- microarray datasets
- biological processes
- gene sets
- informative genes
- systems biology
- protein interaction networks
- gene ontology
- cluster analysis
- high dimensional
- molecular biology
- gene regulatory networks
- experimental conditions
- social network analysis
- principal component analysis
- feature space