ReLA, a local alignment search tool for the identification of distal and proximal gene regulatory regions and their conserved transcription factor binding sites.
Santi GonzálezBàrbara Montserrat-SentísFriman SánchezMontserrat PuiggròsEnrique BlancoAlex RamírezDavid TorrentsPublished in: Bioinform. (2012)
Keyphrases
- transcription factor binding sites
- gene regulatory
- search tools
- motif discovery
- binding sites
- dna sequences
- biological sequences
- transcription factors
- sequence alignment
- sequence databases
- end users
- metadata
- personal information
- file system
- database
- human genome
- sequence data
- rna sequences
- gene regulation
- statistical significance
- genome wide
- microarray
- computational biology
- data mining tasks
- high throughput
- information retrieval
- databases