Towards Index-based Similarity Search for Protein Structure Databases.
Orhan ÇamogluTamer KahveciAmbuj K. SinghPublished in: CSB (2003)
Keyphrases
- similarity search
- protein structure
- indexing techniques
- databases
- similarity queries
- similarity search in metric spaces
- sequence databases
- metric space
- protein sequences
- indexing structure
- query processing
- indexing method
- similarity measure
- high dimensional
- multimedia databases
- molecular biology
- distance function
- knn
- indexing schemes
- database
- secondary structure
- protein structure prediction
- protein tertiary structure
- index structure
- similarity searching
- metric access methods
- r tree
- approximate similarity search
- amino acids
- high dimensional data
- locality sensitive hashing
- exact match
- triangle inequality
- hash functions
- contact map
- cross view
- space partitioning
- efficient similarity search
- biological sequences
- b tree
- database systems
- graph databases
- range queries
- data management
- nearest neighbor
- knowledge discovery
- protein structural
- data sets