Gigabyte-scale alignment acceleration of biological sequences via Ethernet streaming.
Theepan MoorthySathish GopalakrishnanPublished in: FPT (2014)
Keyphrases
- biological sequences
- multiple sequence alignment
- protein sequences
- sequence data
- molecular biology
- smith waterman
- motif finding
- computational biology
- biological data
- dna sequences
- data streams
- sequence alignment
- neural network
- real time
- high speed
- database
- self organizing maps
- high dimensional
- metadata
- binding sites
- data sets