SEMplMe: a tool for integrating DNA methylation effects in transcription factor binding affinity predictions.
Sierra S. NishizakiAlan P. BoylePublished in: BMC Bioinform. (2022)
Keyphrases
- dna binding
- binding sites
- transcription factors
- transcription factor binding sites
- dna sequences
- gene regulation
- genome wide
- gene expression
- transcriptional regulation
- cis regulatory
- motif discovery
- microarray
- chip seq
- sequence data
- component analysis
- high throughput
- biological sequences
- systems biology
- data sets
- highly correlated
- computational biology
- non stationary
- saccharomyces cerevisiae
- high dimensional