Primatologist: A modular segmentation pipeline for macaque brain morphometry.
Yaël BalbastreDenis RivièreNicolas SouedetClara FischerAnne-Sophie HérardSusannah WilliamsMichel E. VandenbergheJulien FlamentRomina Aron-BadinPhilippe HantrayeJean-François ManginThierry DelzescauxPublished in: NeuroImage (2017)
Keyphrases
- corpus callosum
- magnetic resonance images
- gray matter
- brain structures
- caudate nucleus
- brain tumors
- segmentation algorithm
- tissue segmentation
- brain mr images
- image segmentation
- segmentation method
- subcortical structures
- level set
- cerebrospinal fluid
- cortical surface
- brain mri
- human brain
- white matter
- shape prior
- probabilistic atlas
- mri brain images
- processing pipeline
- brain anatomy
- medical images
- multiscale
- partial volume
- fully unsupervised
- region growing
- fully automatic
- mri scans
- watershed transform
- cerebral cortex
- brain atlas
- partial volume effects
- deformation field
- anatomical features
- magnetic resonance
- shape analysis
- medical imaging
- mr images