Reconstructing the Dynamics of HIV Evolution within Hosts from Serial Deep Sequence Data.
Art F. Y. PoonLuke C. SwensonEvelien M. BunnikDiana Edo-MatasHanneke SchuitemakerAngélique B. van 't WoutP. Richard HarriganPublished in: PLoS Comput. Biol. (2012)
Keyphrases
- sequence data
- temporal evolution
- sequence classification
- network dynamics
- population dynamics
- sequence analysis
- evolutionary history
- biological sequences
- evolutionary game theory
- profile hidden markov models
- machine learning
- human immunodeficiency virus
- nucleotide sequences
- data sets
- sequential data
- binding sites
- genome sequences
- mobile agents
- pairwise
- image sequences