Gene Ontology aided Compound Protein Binding Affinity Prediction Using BERT Encoding.
Lingling ZhaoPeijin XieLingfeng HaoTiantian LiChunyu WangPublished in: BIBM (2020)
Keyphrases
- gene ontology
- protein interaction
- protein function
- protein protein interactions
- protein function prediction
- protein interaction data
- microarray
- dna binding
- gene products
- genomic data
- protein complexes
- computational methods
- biological processes
- mhc class ii
- protein interaction networks
- semantic similarity
- information theoretic
- biological data
- gene expression
- microarray expression data
- protein structure prediction
- gene networks
- protein structure
- functional modules
- amino acids
- protein sequences
- biological networks
- major histocompatibility complex
- mutual information
- signaling pathways
- regulatory networks
- network topology