Protein folding structure optimization based on GAPSO algorithm in the off-lattice model.
Xiaoli LinXiaolong ZhangPublished in: BIBM (2014)
Keyphrases
- lattice structure
- optimization model
- probabilistic model
- optimization process
- objective function
- annealing algorithm
- cost function
- optimization algorithm
- tree structure
- optimization method
- em algorithm
- deterministic annealing
- protein folding
- parameter estimation
- clustering method
- energy function
- particle swarm optimization
- bayesian framework
- convergence rate
- simulated annealing
- expectation maximization
- optimal solution
- graphical models
- high level