Distributed-Memory Parallel Contig Generation for De Novo Long-Read Genome Assembly.
Giulia GuidiGabriel RauletDaniel RokhsarLeonid OlikerKatherine A. YelickAydin BuluçPublished in: ICPP (2022)
Keyphrases
- distributed memory
- shared memory
- parallel implementation
- human genome
- ibm sp
- multiprocessor systems
- data parallelism
- parallel computers
- fine grain
- single processor
- genomic sequences
- scientific computing
- sequence data
- parallel architecture
- matrix multiplication
- parallel machines
- multi processor
- message passing
- parallel computing
- parallel architectures
- parallel programming
- data partitioning
- computer architecture
- genome wide
- massively parallel
- parallel algorithm