Incorporating semantic similarity into clustering process for identifying protein complexes from Affinity Purification/Mass Spectrometry data.
Bingjing CaiHaiying WangHuiru ZhengHui WangPublished in: BIBM (2012)
Keyphrases
- semantic similarity
- mass spectrometry data
- protein complexes
- high throughput
- protein protein interactions
- co occurrence
- similarity measure
- gene ontology
- protein interaction
- genomic data
- protein interaction networks
- wordnet
- semantic information
- mass spectrometry
- microarray
- functional modules
- computational approaches
- systems biology
- biological processes
- biological data
- decision trees
- computational methods
- network topology
- databases
- biological networks
- biomedical literature
- computational biology
- database
- data processing
- information retrieval
- data sets