A Structure Based Algorithm for Improving Motifs Prediction.
Sudipta PathakVamsi Krishna KundetiMartin R. SchillerSanguthevar RajasekaranPublished in: PRIB (2013)
Keyphrases
- dynamic programming
- worst case
- prediction algorithm
- learning algorithm
- tree structure
- np hard
- segmentation algorithm
- times faster
- preprocessing
- experimental evaluation
- computationally efficient
- k means
- computational cost
- improved algorithm
- optimal solution
- high accuracy
- detection algorithm
- objective function
- graph structure
- matching algorithm
- genetic algorithm
- optimization algorithm
- input data
- probabilistic model
- cost function
- significant improvement
- computational complexity
- expectation maximization
- linear programming
- graphical models
- prediction model
- search space
- data sets
- motif finding