An improved hidden Markov model for transmembrane protein detection and topology prediction and its applications to complete genomes.
Robel Y. KahsayGuang R. GaoLi LiaoPublished in: Bioinform. (2005)
Keyphrases
- hidden markov models
- contact map
- sequence analysis
- speech recognition
- sequential data
- conditional random fields
- protein structure prediction
- viterbi algorithm
- gesture recognition
- drug design
- continuous hidden markov models
- hidden state
- markov models
- handwritten word recognition
- sequence alignment
- hidden states
- protein sequences
- sequence data
- protein interaction
- multi stream
- markov model
- speech signal
- protein structure
- discriminative training
- protein families
- baum welch
- kernel density
- dynamic probabilistic networks