Genefu: an R/Bioconductor package for computation of gene expression-based signatures in breast cancer.
Deena M. A. GendooNatchar RatanasirigulchaiMarkus S. SchröderLaia ParéJoel S. ParkerAleix PratBenjamin Haibe-KainsPublished in: Bioinform. (2016)
Keyphrases
- gene expression
- breast cancer
- microarray
- gene expression data
- early detection
- logistic regression
- microarray data
- gene expression patterns
- gene expression profiles
- biological processes
- binding sites
- dna microarray
- biological networks
- breast cancer patients
- microarray datasets
- transcription factors
- gene selection
- experimental conditions
- high throughput
- pairwise
- gene expression analysis
- loss function
- support vector
- decision trees