-mers with applications to protein-binding microarrays and synthetic enhancers.
Yaron OrensteinRon ShamirPublished in: Bioinform. (2015)
Keyphrases
- dna binding
- transcription factors
- transcription factor binding sites
- microarray
- gene expression
- binding sites
- high throughput
- microarray data
- gene regulation
- gene expression data
- biological processes
- genome wide
- molecular biology
- saccharomyces cerevisiae
- dna sequences
- protein sequences
- regulatory networks
- amino acids
- regulatory elements
- high dimensionality
- protein structure
- protein protein interactions
- gene selection
- gene ontology
- experimental conditions
- gene expression profiles
- motif discovery
- cis regulatory
- real world
- protein structure prediction
- mhc class ii
- hiv protease
- contact map
- biological networks
- gene expression analysis
- gene networks
- protein function
- genomic data
- sequence alignment
- mass spectrometry
- protein interaction
- component analysis