Fractal MapReduce decomposition of sequence alignment.

Jonas S. Almeida Alexander Grüneberg Wolfgang Maass Susana Vinga

Published in: Algorithms Mol. Biol. (2012)

Keyphrases

sequence alignment
pairwise
protein sequences
fractal dimension
dynamic programming
cloud computing
binding sites
multiple sequence alignment
gpu accelerated
amino acids
phylogenetic analysis
image compression
multiple alignment
comparative genomics