Using Dependency Parsing and Probabilistic Inference to Extract Relationships between Genes, Proteins and Malignancies Implicit Among Multiple Biomedical Research Abstracts.
Ben GoertzelHugo PintoAri HeljakkaMichael RossCassio PennachinIzabela GoertzelPublished in: BioNLP@NAACL-HLT (2006)
Keyphrases
- probabilistic inference
- dependency parsing
- biological entities
- graphical models
- bayesian networks
- conditional probabilities
- message passing
- belief networks
- biomedical literature
- gene expression
- computational methods
- approximate inference
- weighted model counting
- automatic extraction
- syntactic semantic
- gene ontology
- random variables
- graph cuts
- dependency parser
- data sets
- protein sequences
- gene expression data