Defining Reference Sequences for Nocardia Species by Similarity and Clustering Analyses of 16S rRNA Gene Sequence Data.
Manal HelalFanrong KongSharon C. A. ChenMichael BainRichard ChristenVitali SintchenkoPublished in: CoRR (2023)
Keyphrases
- sequence data
- genome sequences
- nucleotide sequences
- alternative splicing
- sequence analysis
- sequence classification
- evolutionary history
- biological sequences
- comparative analysis
- secondary structure
- gene clusters
- k means
- clustering algorithm
- profile hidden markov models
- similarity measure
- genomic sequences
- sequential data
- protein sequences
- semantic similarity
- essential genes
- human genome
- sequence alignment
- binding sites
- cluster analysis
- spectral clustering
- comparative genomics
- sequence databases
- regulatory elements
- sequence similarity
- binary strings
- genetic variation
- dna sequences
- information theoretic