Probabilistic inference of transcription factor concentrations and gene-specific regulatory activities.
Guido SanguinettiNeil D. LawrenceMagnus RattrayPublished in: Bioinform. (2006)
Keyphrases
- probabilistic inference
- transcription factors
- gene expression
- microarray
- gene regulation
- dna binding
- graphical models
- bayesian networks
- regulatory networks
- biomedical literature
- binding sites
- cis regulatory
- saccharomyces cerevisiae
- gene expression data
- approximate inference
- message passing
- belief networks
- biological processes
- dna sequences
- microarray data
- conditional probabilities
- gene selection
- genome wide
- gene sets
- cell cycle
- computational biology
- component analysis
- transcription factor binding sites
- regulatory elements
- systems biology
- gene regulatory networks
- data sets
- high throughput
- probabilistic model
- experimental conditions
- high dimensionality
- belief propagation
- text mining
- pairwise