A loop-counting method for covariate-corrected low-rank biclustering of gene-expression and genome-wide association study data.
Aaditya V. RanganCaroline C. McGroutherJohn KelsoeNicholas J. SchorkEli StahlQian ZhuArjun KrishnanVicky YaoOlga G. TroyanskayaSeda BilalogluPreeti RaghavanSarah BergenAnders JuréusMikael LandenPublished in: PLoS Comput. Biol. (2018)
Keyphrases
- missing data
- gene expression
- gene expression data
- low rank
- data sets
- input data
- high dimensional data
- microarray data
- data analysis
- statistical analysis
- matrix factorization
- pairwise
- high precision
- statistical methods
- gene expression profiles
- microarray
- biological networks
- convex optimization
- similarity measure
- high order
- support vector machine
- knowledge discovery
- data sources