Choosing the best heuristic for seeded alignment of DNA sequences.
Yanni SunJeremy BuhlerPublished in: BMC Bioinform. (2006)
Keyphrases
- dna sequences
- rna sequences
- tandem repeats
- dna computing
- dna sequencing
- human genome
- coding regions
- optimal solution
- dynamic programming
- biological sequences
- motif discovery
- genomic sequences
- gene prediction
- binding sites
- database
- nucleotide sequences
- transcription factors
- sequence patterns
- problems in computational biology
- protein families
- natural language processing
- gene structure prediction