Efficient Motif Discovery in Protein Sequences Using a Branch and Bound Algorithm.
Rahele MohammadiPeyman NeamatollahiMorteza MoradiMahmoud NaghibzadehAbdorreza SavadiPublished in: IEEE J. Biomed. Health Informatics (2024)
Keyphrases
- branch and bound algorithm
- protein sequences
- biological sequences
- motif discovery
- sequence analysis
- lower bound
- branch and bound
- computational biology
- dna sequences
- np hard
- sequence databases
- protein structure
- motif finding
- sequence data
- test problems
- combinatorial optimization
- upper bound
- amino acids
- optimal solution
- multi objective
- biological data
- secondary structure
- data structure
- multiple sequence alignment
- machine learning